SPRAS

Getting Started

  • About SPRAS
  • Installing SPRAS
  • Using SPRAS

Manual

  • File formats

Supported Algorithms

  • Pathway Reconstruction Methods

SPRAS API Docs For Developers

  • spras

Contributing

  • Contributing a new pathway reconstruction algorithm
  • Maintaining SPRAS

Tutorials

  • SPRAS Tutorial
  • Beginner Tutorial - Set up & Running One Algorithm
  • Intermediate Tutorial - Custom Data & Multi-Algorithm Runs
  • Advanced Capabilities and Features
SPRAS
  • Python Module Index

Python Module Index

s
 
s
- spras
    spras.allpairs
    spras.analysis
    spras.analysis.cytoscape
    spras.analysis.ml
    spras.analysis.summary
    spras.config
    spras.containers
    spras.dataset
    spras.domino
    spras.evaluation
    spras.interactome
    spras.meo
    spras.mincostflow
    spras.omicsintegrator1
    spras.omicsintegrator2
    spras.pathlinker
    spras.prm
    spras.runner
    spras.util

© Copyright 2025, Anthony Gitter & Anna Ritz.

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